- Home
- Search Results
- Page 1 of 1
Search for: All records
- 
                                    Total Resources4
- Resource Type
- 
                                    
                                    
                                    
                                    0004000000000000
- More
- Availability
- 
                                    
                                    40
- Author / Contributor
- Filter by Author / Creator
- 
                                    
                                        - 
                                                    
                                                        
                                                            
                                                            Goldenberg, Elazar (4)
- 
                                                    
                                                        
                                                            
                                                            Saha, Barna (4)
- 
                                                    
                                                        
                                                            
                                                            Kociumaka, Tomasz (2)
- 
                                                    
                                                        
                                                            
                                                            Krauthgamer, Robert (2)
- 
                                                    
                                                        
                                                            
                                                            Rubinstein, Aviad (2)
- 
                                                    
                                                        
                                                            
                                                            #Tyler Phillips, Kenneth E. (0)
- 
                                                    
                                                        
                                                            
                                                            #Willis, Ciara (0)
- 
                                                    
                                                        
                                                            
                                                            & Abreu-Ramos, E. D. (0)
- 
                                                    
                                                        
                                                            
                                                            & Abramson, C. I. (0)
- 
                                                    
                                                        
                                                            
                                                            & Abreu-Ramos, E. D. (0)
- 
                                                    
                                                        
                                                            
                                                            & Adams, S.G. (0)
- 
                                                    
                                                        
                                                            
                                                            & Ahmed, K. (0)
- 
                                                    
                                                        
                                                            
                                                            & Ahmed, Khadija. (0)
- 
                                                    
                                                        
                                                            
                                                            & Aina, D.K. Jr. (0)
- 
                                                    
                                                        
                                                            
                                                            & Akcil-Okan, O. (0)
- 
                                                    
                                                        
                                                            
                                                            & Akuom, D. (0)
- 
                                                    
                                                        
                                                            
                                                            & Aleven, V. (0)
- 
                                                    
                                                        
                                                            
                                                            & Andrews-Larson, C. (0)
- 
                                                    
                                                        
                                                            
                                                            & Archibald, J. (0)
- 
                                                    
                                                        
                                                            
                                                            & Arnett, N. (0)
 
- 
                                                    
                                                        
                                                            
                                                            
- Filter by Editor
- 
                                    
                                        - 
                                                    
                                                        
                                                            
                                                            Tauman Kalai, Yael (1)
- 
                                                    
                                                        
                                                            
                                                            null (1)
- 
                                                    
                                                        
                                                            
                                                            & Spizer, S. M. (0)
- 
                                                    
                                                        
                                                            
                                                            & . Spizer, S. (0)
- 
                                                    
                                                        
                                                            
                                                            & Ahn, J. (0)
- 
                                                    
                                                        
                                                            
                                                            & Bateiha, S. (0)
- 
                                                    
                                                        
                                                            
                                                            & Bosch, N. (0)
- 
                                                    
                                                        
                                                            
                                                            & Brennan K. (0)
- 
                                                    
                                                        
                                                            
                                                            & Brennan, K. (0)
- 
                                                    
                                                        
                                                            
                                                            & Chen, B. (0)
- 
                                                    
                                                        
                                                            
                                                            & Chen, Bodong (0)
- 
                                                    
                                                        
                                                            
                                                            & Drown, S. (0)
- 
                                                    
                                                        
                                                            
                                                            & Ferretti, F. (0)
- 
                                                    
                                                        
                                                            
                                                            & Higgins, A. (0)
- 
                                                    
                                                        
                                                            
                                                            & J. Peters (0)
- 
                                                    
                                                        
                                                            
                                                            & Kali, Y. (0)
- 
                                                    
                                                        
                                                            
                                                            & Ruiz-Arias, P.M. (0)
- 
                                                    
                                                        
                                                            
                                                            & S. Spitzer (0)
- 
                                                    
                                                        
                                                            
                                                            & Sahin. I. (0)
- 
                                                    
                                                        
                                                            
                                                            & Spitzer, S. (0)
 
- 
                                                    
                                                        
                                                            
                                                            
- 
                                    Have feedback or suggestions for a way to improve these results?
 !
                                    
                                        
                                            Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher.
                                            Some full text articles may not yet be available without a charge during the embargo (administrative interval).
                                        
                                        
                                        
                                            
                                                
                                             What is a DOI Number?
                                        
                                    
                                
Some links on this page may take you to non-federal websites. Their policies may differ from this site.
- 
            Tauman Kalai, Yael (Ed.)The edit distance between strings classically assigns unit cost to every character insertion, deletion, and substitution, whereas the Hamming distance only allows substitutions. In many real-life scenarios, insertions and deletions (abbreviated indels) appear frequently but significantly less so than substitutions. To model this, we consider substitutions being cheaper than indels, with cost 1/a for a parameter a ≥ 1. This basic variant, denoted ED_a, bridges classical edit distance (a = 1) with Hamming distance (a → ∞), leading to interesting algorithmic challenges: Does the time complexity of computing ED_a interpolate between that of Hamming distance (linear time) and edit distance (quadratic time)? What about approximating ED_a? We first present a simple deterministic exact algorithm for ED_a and further prove that it is near-optimal assuming the Orthogonal Vectors Conjecture. Our main result is a randomized algorithm computing a (1+ε)-approximation of ED_a(X,Y), given strings X,Y of total length n and a bound k ≥ ED_a(X,Y). For simplicity, let us focus on k ≥ 1 and a constant ε > 0; then, our algorithm takes Õ(n/a + ak³) time. Unless a = Õ(1), in which case ED_a resembles the standard edit distance, and for the most interesting regime of small enough k, this running time is sublinear in n. We also consider a very natural version that asks to find a (k_I, k_S)-alignment, i.e., an alignment with at most k_I indels and k_S substitutions. In this setting, we give an exact algorithm and, more importantly, an Õ((nk_I)/k_S + k_S k_I³)-time (1,1+ε)-bicriteria approximation algorithm. The latter solution is based on the techniques we develop for ED_a for a = Θ(k_S/k_I), and its running time is again sublinear in n whenever k_I ≪ k_S and the overall distance is small enough. These bounds are in stark contrast to unit-cost edit distance, where state-of-the-art algorithms are far from achieving (1+ε)-approximation in sublinear time, even for a favorable choice of k.more » « less
- 
            Goldenberg, Elazar; Kociumaka, Tomasz; Krauthgamer, Robert; Saha, Barna (, FOCS)
- 
            Goldenberg, Elazar; Rubinstein, Aviad; Saha, Barna (, STOC)
- 
            Goldenberg, Elazar; Rubinstein, Aviad; Saha, Barna (, STOC 2020)null (Ed.)
 An official website of the United States government
An official website of the United States government 
				
			 
					 
					
 
                                     Full Text Available
                                                Full Text Available